All functions |
|
---|---|
Contacts |
|
HiContacts plotting functionalities |
|
Compute the law of distance-dependent contact frequency, a.k.a. P(s) |
|
|
HiContacts arithmetics functionalities |
cisTransRatio |
|
Contact map compartments |
|
Contact map insulation |
|
Finding loops in contact map |
|
|
Matrix palettes |
Plotting virtual 4C profiles |
|
Plotting a contact matrix |
|
Plotting a P(s) distance law |
|
Plotting saddle plots |
|
Plotting scalograms |
|
Compute a scalogram of contacts |
|
Aligning tracks with HiCExperiment objects |
|
Computing virtual 4C profiles |