HiCExperiment binning methods — bin-methods • HiCExperiment

HiCExperiment binning methods

Usage

# S4 method for class 'GInteractions,numeric'
bin(x, resolution, seqinfo = NULL)

# S4 method for class 'PairsFile,numeric'
bin(x, resolution, seqinfo = NULL)

Arguments

x: A PairsFile or GInteractions object
resolution: Which resolution to use to bin the interactions
seqinfo: Seqinfo object

Examples

pairsf <- HiContactsData::HiContactsData('yeast_wt', 'pairs.gz')
#> see ?HiContactsData and browseVignettes('HiContactsData') for documentation
#> loading from cache
pf <- PairsFile(pairsf)