Bin coverage contained in a CoverageExperiment into an
AggregatedCoverage object.
Usage
# S4 method for class 'CoverageExperiment'
aggregate(x, bin = 1, ...)
Arguments
- x
a CoverageExperiment object
- bin
an integer to bin each assay by. The width of the
AggregatedCoverage object should be a multiple of bin.
- ...
ignored
Value
an AggregatedCoverage object
Examples
data(ce)
aggregate(ce, bin = 10)
#> class: AggregatedCoverage
#> dim: 1 2
#> metadata(0):
#> assays(8): mean median ... ci_low ci_high
#> rownames(1): Scc1
#> rowData names(2): features n
#> colnames(2): RNA_fwd RNA_rev
#> colData names(1): track
#> width: 3000
#> binning: 100